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Via the Moon Pearl, Link has these resistances in the same way 682 does. Resistance to transmutation and Powe Nullification. See, the Dark World transmutes you into a reflection of your inner self. Link was originally turned into a harmless anthro bunny, reflecting his inner qualities. Link's superhuman qualities were instantly gone. He couldn't even wield a sword. Unless you're a monster connected to Ganon, this happens to all. And there's several people that happens to. Once Link gets the Moon Pearl, he is completely immune to this when he enters the Dark World.
Furthermore, in OoT, one who enters the Lost Woods while not being a Kokiri turns into a Stalfos or Skull Kid. We see the only Skull Kid in OoT in there (he comes back, and we see a guy who eventually becomes a Stalfos during the trading sequence for the Biggoron Sword. Link also enters the woods in ALTTP, Classic, TP, and BoTW with no ill effects. I doubt it for ALTTP though, as there's several bandits there as well, and Link goes in there prior to getting the Moon Pearl
Furthermore, in OoT, one who enters the Lost Woods while not being a Kokiri turns into a Stalfos or Skull Kid. We see the only Skull Kid in OoT in there (he comes back, and we see a guy who eventually becomes a Stalfos during the trading sequence for the Biggoron Sword. Link also enters the woods in ALTTP, Classic, TP, and BoTW with no ill effects. I doubt it for ALTTP though, as there's several bandits there as well, and Link goes in there prior to getting the Moon Pearl